ENCFF903MJZ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous adipose tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR020VES
Description: Part of ENCODE experiment ENCSR020VES. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 354.00 4.43 1.03 100.0 RPL7A-207 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000489392.1 ENST00000489392.1_110_189_+ 110–189 1.00 0.01 0.00 100.0 RPL7A-207 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 4422.00 55.39 12.90 72.97 RPL7A-207 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 146.00 1.83 0.43 100.0 RPL7A-207 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000490232.3 ENST00000490232.3_229_300_+ 229–300 609.00 3.83 1.78 14.76 RN7SL2-201 misc RNA subcutaneous adipose tissue (Tissue)
ENST00000490232.3 ENST00000490232.3_219_300_+ 219–300 757.00 4.76 2.21 100.0 RN7SL2-201 misc RNA subcutaneous adipose tissue (Tissue)
ENST00000493449.5 ENST00000493449.5_96_109_+ 96–109 414.00 83.13 1.21 100.0 RGS11-208 retained intron subcutaneous adipose tissue (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 7454.00 7.43 21.74 85.09 NOP56-217 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 70498.00 70.25 205.64 80.2 NOP56-217 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 87110.00 71.47 254.10 93.7 RABGGTB-213 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 1015.00 0.83 2.96 100.0 RABGGTB-213 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 17553.00 14.40 51.20 92.47 RABGGTB-213 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 300.00 0.25 0.88 60.61 RABGGTB-213 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 688.00 0.56 2.01 100.0 RABGGTB-213 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 323.00 0.27 0.94 100.0 RABGGTB-213 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 195.00 0.16 0.57 39.39 RABGGTB-213 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 4394.00 77.98 12.82 100.0 GNL3-211 retained intron subcutaneous adipose tissue (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 515.00 9.14 1.50 100.0 GNL3-211 retained intron subcutaneous adipose tissue (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 228.00 2.52 0.67 100.0 RPL5-205 retained intron subcutaneous adipose tissue (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 7495.00 82.76 21.86 100.0 RPL5-205 retained intron subcutaneous adipose tissue (Tissue)
ENST00000497519.1 ENST00000497519.1_675_769_+ 675–769 4.00 0.04 0.01 100.0 RPL5-205 retained intron subcutaneous adipose tissue (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 39.00 1.98 0.11 100.0 ZBED9-AS1-201 lncRNA subcutaneous adipose tissue (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 4207.00 89.68 12.27 100.0 RPS3A-206 retained intron subcutaneous adipose tissue (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 12564.00 96.31 36.65 100.0 COX7C-203 protein coding subcutaneous adipose tissue (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1715.00 5.38 5.00 100.0 RACK1-229 protein coding subcutaneous adipose tissue (Tissue)