ENCFF903MJZ

Library Details

Organism: Homo Sapiens
Biosample: subcutaneous adipose tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR020VES
Description: Part of ENCODE experiment ENCSR020VES. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 323.00 0.14 0.94 100.0 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 126287.00 56.42 368.38 92.85 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 913.00 0.41 2.66 100.0 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 1680.00 0.75 4.90 44.35 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 3250.00 1.45 9.48 68.08 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 10.00 0.00 0.03 100.0 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 2181.00 0.97 6.36 100.0 EIF4A2-219 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 42912.00 96.97 125.17 100.0 RPS8-207 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 221.00 21.39 0.64 100.0 RPL7A-206 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 237.00 22.94 0.69 100.0 RPL7A-206 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 34.00 3.29 0.10 100.0 RPL7A-206 protein coding CDS not defined subcutaneous adipose tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 2441.00 0.87 7.12 100.0 RPL21-209 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 408.00 0.15 1.19 100.0 RPL21-209 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 8.00 0.00 0.02 100.0 RPL21-209 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 61899.00 22.02 180.56 98.91 RPL21-209 retained intron subcutaneous adipose tissue (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 213705.00 76.04 623.38 98.14 RPL21-209 retained intron subcutaneous adipose tissue (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 265.00 32.20 0.77 100.0 GABRE-209 retained intron subcutaneous adipose tissue (Tissue)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 46643.00 29.19 136.06 75.99 RPL13A-212 retained intron subcutaneous adipose tissue (Tissue)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 105.00 0.07 0.31 100.0 RPL13A-212 retained intron subcutaneous adipose tissue (Tissue)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 327.00 0.20 0.95 100.0 RPL13A-212 retained intron subcutaneous adipose tissue (Tissue)
ENST00000488946.1 ENST00000488946.1_1095_1159_+ 1095–1159 552.00 0.35 1.61 100.0 RPL13A-212 retained intron subcutaneous adipose tissue (Tissue)
ENST00000488946.1 ENST00000488946.1_1364_1441_+ 1364–1441 1169.00 0.73 3.41 87.04 RPL13A-212 retained intron subcutaneous adipose tissue (Tissue)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 57587.00 36.03 167.98 99.14 RPL13A-212 retained intron subcutaneous adipose tissue (Tissue)
ENST00000488946.1 ENST00000488946.1_148_235_+ 148–235 4.00 0.00 0.01 100.0 RPL13A-212 retained intron subcutaneous adipose tissue (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 19020.00 11.90 55.48 100.0 RPL13A-212 retained intron subcutaneous adipose tissue (Tissue)