ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 20.00 0.03 0.06 100.0 RNU5A-1-201 snRNA Peyer's patch (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 1572.51 2.71 4.75 52.14 RNU5A-1-201 snRNA Peyer's patch (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 7000.00 12.04 21.15 73.02 RNU5A-1-201 snRNA Peyer's patch (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 5439.00 9.36 16.43 59.68 RNU5A-1-201 snRNA Peyer's patch (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 7378.00 12.69 22.29 65.14 RNU5A-1-201 snRNA Peyer's patch (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 1050.00 90.21 3.17 100.0 SNORD114-14-201 snoRNA Peyer's patch (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1350.00 4.04 4.08 100.0 SNORD104-201 snoRNA Peyer's patch (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 37.00 0.11 0.11 100.0 SNORD104-201 snoRNA Peyer's patch (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 61548.00 58.29 185.95 69.89 RNA5SP358-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 17.00 1.12 0.05 43.59 RNA5SP145-201 rRNA pseudogene Peyer's patch (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 5.00 4.72 0.02 100.0 RNY4P9-201 misc RNA Peyer's patch (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 1536.00 12.15 4.64 100.0 RNU5B-1-201 snRNA Peyer's patch (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 4582.00 36.25 13.84 100.0 RNU5B-1-201 snRNA Peyer's patch (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 59.00 0.47 0.18 100.0 RNU5B-1-201 snRNA Peyer's patch (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 35.00 4.41 0.11 100.0 RNY4P27-201 misc RNA Peyer's patch (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 1.00 0.13 0.00 100.0 RNY4P27-201 misc RNA Peyer's patch (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 163.00 20.43 0.49 100.0 Y_RNA.136-201 misc RNA Peyer's patch (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 2759.00 95.11 8.34 99.96 SNORD114-25-201 snoRNA Peyer's patch (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 366.00 84.33 1.11 100.0 SNORD113-7-201 snoRNA Peyer's patch (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 43.00 22.28 0.13 100.0 Y_RNA.181-201 misc RNA Peyer's patch (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 220.00 9.16 0.66 100.0 RNY1-201 misc RNA Peyer's patch (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 510.84 21.26 1.54 67.04 RNY1-201 misc RNA Peyer's patch (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 216.93 9.03 0.66 41.01 RNY1-201 misc RNA Peyer's patch (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 27.00 1.12 0.08 100.0 RNY1-201 misc RNA Peyer's patch (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 7841.23 6.16 23.69 39.9 RNA5SP202-201 rRNA pseudogene Peyer's patch (Tissue)