ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 64.00 6.18 0.27 100.0 SNORA31-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 94.00 2.68 0.40 100.0 RNA5SP389-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 35.00 1.00 0.15 23.65 RNA5SP389-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 58.00 1.65 0.25 39.73 RNA5SP389-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 25.00 0.71 0.11 100.0 RNA5SP389-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 123.13 0.55 0.52 47.73 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 6.00 0.03 0.03 100.0 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 2111.00 9.50 8.99 83.04 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 912.00 4.10 3.88 69.57 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 117.00 0.53 0.50 100.0 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 559.48 2.52 2.38 37.45 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1196.00 5.38 5.09 42.2 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 644.80 2.90 2.75 63.34 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 744.00 3.35 3.17 62.52 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 3804.00 17.12 16.20 78.89 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 175.11 0.79 0.75 71.18 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 725.00 3.26 3.09 29.5 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1316.00 5.92 5.60 77.09 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 4499.00 20.25 19.16 77.17 RNU5A-1-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 1425.00 87.96 6.07 100.0 SNORD114-14-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 1210.00 5.82 5.15 100.0 SNORD104-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 53.00 0.26 0.23 100.0 SNORD104-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 149.00 29.33 0.63 95.51 SNORD115-9-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 34688.00 70.96 147.71 84.13 RNA5SP358-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 97.00 2.63 0.41 66.44 RNA5SP145-201 rRNA pseudogene gastroesophageal sphincter (Tissue)