ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 5335.00 1.78 22.72 100.0 MIRLET7A1HG-203 lncRNA gastroesophageal sphincter (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 1019.00 86.72 4.34 100.0 MEG8-225 lncRNA gastroesophageal sphincter (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 73784.00 92.43 314.19 100.0 SNHG29-232 lncRNA gastroesophageal sphincter (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 263.00 0.33 1.12 100.0 SNHG29-232 lncRNA gastroesophageal sphincter (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 231.00 0.29 0.98 100.0 SNHG29-232 lncRNA gastroesophageal sphincter (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 990.00 1.24 4.22 100.0 SNHG29-232 lncRNA gastroesophageal sphincter (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 3662.00 4.59 15.59 100.0 SNHG29-232 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 261.00 1.08 1.11 100.0 SNHG14-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 9931.00 41.03 42.29 96.4 SNHG14-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 8.00 0.03 0.03 100.0 SNHG14-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 2545.00 10.51 10.84 100.0 SNHG14-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 2349.00 9.70 10.00 100.0 SNHG14-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 3809.00 15.74 16.22 86.53 SNHG14-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 36.00 0.52 0.15 4.74 ENST00000655317 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 489.00 7.11 2.08 100.0 ENST00000655317 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 2362.00 34.34 10.06 97.72 ENST00000655317 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 822.00 11.95 3.50 100.0 ENST00000655317 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 177.00 0.40 0.75 63.21 LINC01962-202 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 40703.00 91.95 173.32 100.0 LINC01962-202 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 459.00 1.04 1.95 100.0 LINC01962-202 lncRNA gastroesophageal sphincter (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 3291.00 30.11 14.01 93.65 SNHG14-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 10721.00 95.41 45.65 100.0 MEG8-228 lncRNA gastroesophageal sphincter (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 1422.00 35.46 6.06 100.0 SNHG14-254 lncRNA gastroesophageal sphincter (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 1319.00 24.53 5.62 100.0 SNHG14-261 lncRNA gastroesophageal sphincter (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 2016.00 37.50 8.58 95.68 SNHG14-261 lncRNA gastroesophageal sphincter (Tissue)