ENCFF800ZUT

Library Details

Organism: Homo Sapiens
Biosample: tibial nerve (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR203DPX
Description: Part of ENCODE experiment ENCSR203DPX. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's tibial nerve tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 1721.00 44.78 14.30 97.51 MIR23AHG-201 lncRNA tibial nerve (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 325.00 8.46 2.70 82.49 MIR23AHG-201 lncRNA tibial nerve (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 673.00 17.51 5.59 93.73 MIR23AHG-201 lncRNA tibial nerve (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 329.00 8.56 2.73 82.87 MIR23AHG-201 lncRNA tibial nerve (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 8.00 7.92 0.07 100.0 ODAD3-204 nonsense mediated decay tibial nerve (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 140.00 3.44 1.16 100.0 VMP1-217 retained intron tibial nerve (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 58.00 1.43 0.48 100.0 VMP1-217 retained intron tibial nerve (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 2629.00 64.67 21.85 75.03 VMP1-217 retained intron tibial nerve (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 448.00 27.60 3.72 100.0 C19orf48P-203 retained intron tibial nerve (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 45.00 2.77 0.37 100.0 C19orf48P-203 retained intron tibial nerve (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 137243.00 79.18 1140.56 80.72 CARMN-209 lncRNA tibial nerve (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 233.00 53.08 1.94 100.0 PPFIA1P1-201 processed pseudogene tibial nerve (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 496.00 29.33 4.12 100.0 SNORD114-21-201 snoRNA tibial nerve (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 835.00 49.38 6.94 100.0 SNORD114-21-201 snoRNA tibial nerve (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 1735.00 97.69 14.42 100.0 MIR98-201 miRNA tibial nerve (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 50.00 30.86 0.42 100.0 SNORD113-5-201 snoRNA tibial nerve (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 33.00 71.74 0.27 100.0 MIR15A-201 miRNA tibial nerve (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 278.00 68.14 2.31 100.0 SNHG21-206 retained intron tibial nerve (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 126933.00 48.82 1054.88 98.4 MIR486-1-201 miRNA tibial nerve (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 51720.00 81.82 429.82 99.98 NOP56-219 retained intron tibial nerve (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 508.00 0.80 4.22 100.0 NOP56-219 retained intron tibial nerve (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 532.00 0.84 4.42 100.0 NOP56-219 retained intron tibial nerve (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 4209.00 6.66 34.98 55.19 NOP56-219 retained intron tibial nerve (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 1712.00 10.56 14.23 100.0 RNA5-8SN2-201 rRNA tibial nerve (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 4093.66 25.24 34.02 39.72 RNA5-8SN2-201 rRNA tibial nerve (Tissue)