ENCFF800ZUT

Library Details

Organism: Homo Sapiens
Biosample: tibial nerve (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR203DPX
Description: Part of ENCODE experiment ENCSR203DPX. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's tibial nerve tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 673.00 27.21 5.59 100.0 SNORD62B-201 snoRNA tibial nerve (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 5.00 100.00 0.04 100.0 MRPL32-203 nonsense mediated decay tibial nerve (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 35.00 67.31 0.29 100.0 ENST00000436739 lncRNA tibial nerve (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 914.00 63.30 7.60 91.86 TMEM107-204 protein coding tibial nerve (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 107.00 7.41 0.89 100.0 TMEM107-204 protein coding tibial nerve (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 17.00 1.18 0.14 34.0 TMEM107-204 protein coding tibial nerve (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 1261.00 71.89 10.48 100.0 SNHG16-201 lncRNA tibial nerve (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 50211.00 81.94 417.28 94.26 SNORD105B-201 snoRNA tibial nerve (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 338.00 39.95 2.81 58.58 SNORD121B-201 snoRNA tibial nerve (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 4.00 0.60 0.03 100.0 SNORD127-201 snoRNA tibial nerve (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 12373.00 95.77 102.83 100.0 SNORD42B-201 snoRNA tibial nerve (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 255.00 4.14 2.12 100.0 RNY4P25-201 misc RNA tibial nerve (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 270.00 83.08 2.24 100.0 SNORD121A-201 snoRNA tibial nerve (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 3648.00 97.64 30.32 100.0 SNORD126-201 snoRNA tibial nerve (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 689.00 40.32 5.73 100.0 SNHG12-201 retained intron tibial nerve (Tissue)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 3139.00 96.47 26.09 100.0 SMC1A-204 retained intron tibial nerve (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 673.00 34.55 5.59 100.0 DDX39B-219 retained intron tibial nerve (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 399.00 20.48 3.32 100.0 DDX39B-219 retained intron tibial nerve (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 1566.00 79.61 13.01 100.0 RPS8-206 protein coding CDS not defined tibial nerve (Tissue)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 778.00 6.63 6.47 99.62 RPL13-207 retained intron tibial nerve (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 6320.00 53.86 52.52 100.0 RPL13-207 retained intron tibial nerve (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 5406.00 2.55 44.93 43.33 EIF4A2-219 retained intron tibial nerve (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 364.00 0.17 3.03 48.66 EIF4A2-219 retained intron tibial nerve (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 2512.00 1.19 20.88 48.15 EIF4A2-219 retained intron tibial nerve (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 103.00 0.05 0.86 46.61 EIF4A2-219 retained intron tibial nerve (Tissue)