ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 4.00 0.44 0.03 22.22 7SK.1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 208.00 23.01 1.50 88.14 7SK.1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 423.00 44.62 3.05 100.0 RNA5SP77-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 2745.00 42.17 19.79 100.0 SNORD114-22-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 3500.00 53.76 25.24 97.66 SNORD114-22-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 507.00 3.56 3.66 100.0 SNORD6-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 11587.00 81.41 83.55 100.0 SNORD6-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 1181.00 4.33 8.52 100.0 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 3564.89 13.06 25.71 34.24 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 325.00 1.19 2.34 100.0 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 1291.00 4.73 9.31 100.0 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 3750.00 13.74 27.04 90.89 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 7184.00 26.32 51.80 98.63 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 6749.05 24.73 48.67 64.83 SNORD82-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 361214.00 96.53 2604.68 97.95 MIR146B-201 miRNA upper lobe of left lung (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 472.00 71.52 3.40 100.0 SNHG20-201 lncRNA upper lobe of left lung (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 183.00 26.37 1.32 100.0 ATP5MK-205 protein coding upper lobe of left lung (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 19.00 2.74 0.14 100.0 ATP5MK-205 protein coding upper lobe of left lung (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 26.00 18.84 0.19 100.0 LINC01556-201 lncRNA upper lobe of left lung (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 237.00 46.29 1.71 100.0 ATAD3A-202 protein coding upper lobe of left lung (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 17.00 8.72 0.12 32.08 TMC5-202 protein coding upper lobe of left lung (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 23.00 31.94 0.17 100.0 ZMYM2-203 protein coding upper lobe of left lung (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 91.00 3.85 0.66 100.0 RNVU1-7-201 snRNA upper lobe of left lung (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 5.00 0.18 0.04 100.0 SNORD24-201 snoRNA upper lobe of left lung (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 254.00 69.21 1.83 100.0 Y_RNA.389-201 misc RNA upper lobe of left lung (Tissue)