ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 1398.00 5.01 10.08 56.62 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 224.00 0.80 1.62 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 106.00 0.38 0.76 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 370.00 1.33 2.67 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 2764.00 9.91 19.93 74.22 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 4328.00 15.00 31.21 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 8353.00 28.96 60.23 54.58 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 2432.00 9.15 17.54 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 14757.00 75.32 106.41 93.42 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 227.00 1.16 1.64 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 20.00 0.10 0.14 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 185.00 0.94 1.33 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 190.00 0.97 1.37 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 1597.00 6.39 11.52 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 13681.00 63.87 98.65 97.58 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 300.00 1.33 2.16 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 148.00 3.07 1.07 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 339.00 7.03 2.44 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 2175.00 45.13 15.68 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 54.00 1.12 0.39 56.25 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 435.00 0.06 3.14 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 908.00 46.93 6.55 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 7.00 0.83 0.05 77.78 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 2.00 0.24 0.01 22.22 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 2202.00 19.71 15.88 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA upper lobe of left lung (Tissue)