ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 71.00 46.41 0.51 100.0 MIR374A-201 miRNA upper lobe of left lung (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 8.00 88.89 0.06 100.0 MIR31-201 miRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 25.00 0.02 0.18 71.43 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 35.97 0.03 0.26 52.89 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 522.00 0.39 3.76 45.63 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 53.98 0.04 0.39 53.98 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 94.00 0.07 0.68 72.31 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 1.00 0.00 0.01 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 29.00 0.02 0.21 50.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 34.00 0.03 0.25 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 18.00 0.01 0.13 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 2132.00 1.61 15.37 77.41 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 93.00 0.07 0.67 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 224.00 28.57 1.62 100.0 Y_RNA.14-201 misc RNA upper lobe of left lung (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 11.00 2.47 0.08 100.0 RNU5E-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 142.00 14.20 1.02 100.0 SNORA31-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 32.00 0.93 0.23 100.0 RNA5SP389-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 19.00 0.55 0.14 39.58 RNA5SP389-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 16.00 0.46 0.12 64.0 RNA5SP389-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 759.20 4.03 5.47 58.04 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1970.00 10.47 14.21 70.79 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2355.00 12.51 16.98 62.1 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 2462.00 13.08 17.75 69.33 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 620.76 3.30 4.48 59.46 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 2402.00 12.76 17.32 65.31 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)