ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1912.00 21.48 5.86 52.13 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 947.00 12.44 2.90 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 73.00 0.99 0.22 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 81.00 1.10 0.25 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 344.00 4.68 1.05 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 502.00 6.83 1.54 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 3860.00 52.52 11.83 92.7 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 818.00 11.35 2.51 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 1289.00 22.53 3.95 85.14 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 180.00 3.03 0.55 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 1092.00 19.03 3.35 68.42 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 49.00 0.85 0.15 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 57.00 0.99 0.17 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 586.00 10.21 1.80 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 2070.00 1.51 6.34 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 47.00 7.04 0.14 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 1.00 0.41 0.00 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 964.00 12.97 2.95 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 1.00 0.01 0.00 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 258.00 48.41 0.79 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 315.00 52.41 0.97 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 80.00 13.38 0.25 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 94.00 0.19 0.29 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 1930.00 3.84 5.92 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 72.00 0.14 0.22 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA gastroesophageal sphincter (Tissue)