ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 15136.00 35.42 46.39 78.9 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 44.00 0.10 0.13 100.0 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 23.00 22.12 0.07 100.0 MT-TD-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 3117.00 36.60 9.55 100.0 MT-TK-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 2992.00 35.13 9.17 100.0 MT-TK-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 146.00 1.71 0.45 100.0 MT-TK-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 72.00 0.85 0.22 100.0 MT-TK-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 290.00 13.63 0.89 96.03 MT-TS2-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 51.00 2.40 0.16 100.0 MT-TS2-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 59.00 2.77 0.18 100.0 MT-TS2-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 83.00 6.67 0.25 100.0 MT-TL2-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 371327.00 86.41 1138.09 91.49 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 273.00 0.06 0.84 100.0 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 67.00 0.02 0.21 100.0 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 427.00 0.10 1.31 86.44 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 431.00 0.10 1.32 91.7 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 39.00 0.01 0.12 10.46 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 3.00 42.86 0.01 100.0 MIR196A1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 622.00 5.53 1.91 100.0 MT-RNR1-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 5630.00 50.08 17.26 100.0 MT-RNR1-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 236.00 80.82 0.72 100.0 MIR454-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 271.00 78.55 0.83 100.0 MIR501-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 532.00 88.52 1.63 100.0 MIR769-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 960.00 68.23 2.94 100.0 KRTAP19-1-201 protein coding gastroesophageal sphincter (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 11.00 16.92 0.03 100.0 MIR708-201 miRNA gastroesophageal sphincter (Tissue)