ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 452.00 60.27 2.91 100.0 Y_RNA.389-201 misc RNA sigmoid colon (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 57599.00 96.25 370.55 99.9 SNORD101-201 snoRNA sigmoid colon (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 26.00 0.04 0.17 100.0 SNORD101-201 snoRNA sigmoid colon (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 394.00 0.66 2.53 100.0 SNORD101-201 snoRNA sigmoid colon (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 27117.00 96.75 174.45 100.0 SNORD37-201 snoRNA sigmoid colon (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 77098.00 96.16 495.99 100.0 SNORD59A-201 snoRNA sigmoid colon (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 67.00 34.36 0.43 100.0 SNORA7B-201 snoRNA sigmoid colon (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 31.00 5.59 0.20 100.0 Y_RNA.555-201 misc RNA sigmoid colon (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 11118.00 93.18 71.52 94.52 MIR25-201 miRNA sigmoid colon (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 28018.00 94.04 180.25 98.59 MIR99B-201 miRNA sigmoid colon (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 9502.00 44.96 61.13 86.23 MIR23B-201 miRNA sigmoid colon (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 11038.00 52.23 71.01 81.1 MIR23B-201 miRNA sigmoid colon (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 11.00 2.80 0.07 100.0 MIR203A-201 miRNA sigmoid colon (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 167.00 1.73 1.07 100.0 MIR199B-201 miRNA sigmoid colon (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 8404.00 87.15 54.06 91.34 MIR199B-201 miRNA sigmoid colon (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 1597.00 96.03 10.27 100.0 MIR30B-201 miRNA sigmoid colon (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 1098.00 97.77 7.06 100.0 MIR181D-201 miRNA sigmoid colon (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 135.00 97.83 0.87 100.0 MIR215-201 miRNA sigmoid colon (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 788.00 0.96 5.07 100.0 MIR181A2-201 miRNA sigmoid colon (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 56665.00 99.10 364.54 99.62 MIR191-201 miRNA sigmoid colon (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 16.00 37.21 0.10 39.02 MIR149-201 miRNA sigmoid colon (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 90.00 4.20 0.58 100.0 MIR181C-201 miRNA sigmoid colon (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1966.00 91.74 12.65 98.2 MIR181C-201 miRNA sigmoid colon (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 52.00 82.54 0.33 100.0 MIR194-1-201 miRNA sigmoid colon (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 188.00 81.39 1.21 81.39 MIR128-2-201 miRNA sigmoid colon (Tissue)