ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 3343.94 1.96 21.51 64.36 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 669.00 0.39 4.30 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 2088.00 1.22 13.43 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 651.00 0.38 4.19 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 2821.06 1.65 18.15 49.74 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 3065.00 1.80 19.72 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 4696.00 2.75 30.21 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 7435.91 4.36 47.84 38.9 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 322.00 0.19 2.07 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 1096.00 25.14 7.05 100.0 SNORD114-9-201 snoRNA sigmoid colon (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 2735.00 62.74 17.59 100.0 SNORD114-9-201 snoRNA sigmoid colon (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 3956.00 21.24 25.45 100.0 Y_RNA.234-201 misc RNA sigmoid colon (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 1001.00 4.33 6.44 100.0 RNA5SP141-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 240.00 65.57 1.54 100.0 SNORD114-15-201 snoRNA sigmoid colon (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 49.00 29.34 0.32 100.0 ENST00000364722 snoRNA sigmoid colon (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 174.00 45.43 1.12 100.0 SNORD113-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 3018.00 68.10 19.42 100.0 SNORD52-201 snoRNA sigmoid colon (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 3591.00 75.87 23.10 100.0 SNORD114-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 40.00 0.85 0.26 100.0 SNORD114-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 747.00 15.78 4.81 100.0 SNORD114-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 27.00 0.72 0.17 100.0 RNA5SP298-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 824.00 82.81 5.30 100.0 SNORD113-9-201 snoRNA sigmoid colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 9004.00 69.18 57.92 100.0 SNORD38A-201 snoRNA sigmoid colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 345.00 2.65 2.22 100.0 SNORD38A-201 snoRNA sigmoid colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 2456.00 18.87 15.80 100.0 SNORD38A-201 snoRNA sigmoid colon (Tissue)