ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 200467.00 41.52 1289.65 98.23 SNHG12-223 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 281.00 0.54 1.81 100.0 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 31442.00 59.87 202.27 100.0 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 148.00 0.28 0.95 36.27 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 670.00 1.28 4.31 100.0 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 567.34 1.08 3.65 46.58 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 428.70 0.82 2.76 44.24 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 618.62 1.18 3.98 35.39 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 8920.00 16.99 57.38 83.58 SNHG25-206 lncRNA sigmoid colon (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 362.00 76.21 2.33 85.38 MIR155HG-205 lncRNA sigmoid colon (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 26.00 74.29 0.17 100.0 ENST00000784740 lncRNA sigmoid colon (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 234.00 3.06 1.51 100.0 ENST00000785178 lncRNA sigmoid colon (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 158.00 1.89 1.02 23.9 ENST00000786284 lncRNA sigmoid colon (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 660.00 7.91 4.25 80.68 ENST00000786284 lncRNA sigmoid colon (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 2885.00 34.56 18.56 100.0 ENST00000786284 lncRNA sigmoid colon (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 1742.92 37.22 11.21 52.25 ENST00000797550 lncRNA sigmoid colon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 1338.26 28.58 8.61 40.12 ENST00000797550 lncRNA sigmoid colon (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 428.00 9.14 2.75 80.91 ENST00000797550 lncRNA sigmoid colon (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 73783.00 85.15 474.66 92.42 MIR181A1HG-212 lncRNA sigmoid colon (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 182.00 0.21 1.17 100.0 MIR181A1HG-212 lncRNA sigmoid colon (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 11.00 55.00 0.07 100.0 C19orf48P-218 lncRNA sigmoid colon (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 1035.00 59.76 6.66 93.33 SNHG18-220 lncRNA sigmoid colon (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 793.00 27.61 5.10 100.0 ENST00000817026 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 117.00 1.16 0.75 84.17 ENST00000823279 lncRNA sigmoid colon (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 26.00 0.26 0.17 100.0 ENST00000823279 lncRNA sigmoid colon (Tissue)