ENCFF720JFQ

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 2.00 0.24 0.02 100.0 RNU5A-1-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 123.13 14.82 1.13 32.58 RNU5A-1-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1.00 0.12 0.01 100.0 RNU5A-1-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 4.00 0.48 0.04 80.0 RNU5A-1-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 18.00 2.17 0.17 100.0 RNU5A-1-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 1.00 0.12 0.01 33.33 RNU5A-1-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 4.00 0.48 0.04 100.0 RNU5A-1-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 280.73 33.78 2.58 72.17 RNU5A-1-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 33.00 2.32 0.30 100.0 SNORD104-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 2800.00 13.76 25.72 71.52 RNA5SP358-201 rRNA pseudogene mesendoderm (In vitro differentiated cells)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 593.00 1.10 5.45 81.23 RNA5SP145-201 rRNA pseudogene mesendoderm (In vitro differentiated cells)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 1.00 2.94 0.01 100.0 Y_RNA.105-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 10.00 3.11 0.09 100.0 RNU5B-1-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 9.00 69.23 0.08 100.0 SNORD115-18-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 12.00 0.70 0.11 92.31 RNY4P27-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 1.00 0.06 0.01 50.0 RNY4P27-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 56.00 5.24 0.51 100.0 Y_RNA.136-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 5.00 3.01 0.05 83.33 SNORD114-25-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 14.00 51.85 0.13 100.0 SNORD113-7-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 33.00 8.89 0.30 100.0 Y_RNA.181-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 1.00 25.00 0.01 100.0 SNORD115-30-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 746.00 5.78 6.85 100.0 RNY1-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 3522.55 27.30 32.36 67.3 RNY1-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 1036.21 8.03 9.52 30.04 RNY1-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 2.00 0.02 0.02 100.0 RNY1-201 misc RNA mesendoderm (In vitro differentiated cells)