ENCFF720JFQ

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 42.00 30.43 0.39 100.0 MEG9-206 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 15.00 10.87 0.14 100.0 MEG9-206 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 7.00 5.07 0.06 100.0 MEG9-206 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 3333.00 12.12 30.61 100.0 DNAJC5-203 nonsense mediated decay mesendoderm (In vitro differentiated cells)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 864.00 5.51 7.94 100.0 ENST00000707189 TEC mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 36.00 0.00 0.33 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 1085836.93 64.77 9973.65 71.67 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 5799.00 0.35 53.27 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 10087.00 0.60 92.65 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 476240.22 28.41 4374.37 31.42 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 32789.00 1.96 301.17 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 359.00 0.02 3.30 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 14638.00 0.87 134.45 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 25746.00 1.54 236.48 100.0 MIR17HG-214 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 69226.00 46.28 635.86 100.0 SNHG32-223 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 1827.00 1.22 16.78 100.0 SNHG32-223 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 84.00 0.06 0.77 100.0 SNHG32-223 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 317.00 0.21 2.91 93.79 SNHG32-223 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 69821.00 46.68 641.32 100.0 SNHG32-223 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 3788.00 34.16 34.79 98.85 SNHG32-227 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 4924.00 44.40 45.23 100.0 SNHG32-227 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 18.00 0.16 0.17 100.0 SNHG32-227 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 162.00 1.46 1.49 100.0 SNHG32-227 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 56.00 62.22 0.51 100.0 B4GALT1-203 nonsense mediated decay mesendoderm (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 211.00 1.73 1.94 100.0 ENST00000722183 lncRNA mesendoderm (In vitro differentiated cells)