ENCFF720JFQ

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 148.00 20.56 1.36 100.0 SCARNA4-202 scaRNA mesendoderm (In vitro differentiated cells)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 9.00 10.71 0.08 100.0 ENST00000625572 miRNA mesendoderm (In vitro differentiated cells)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 23.00 1.09 0.21 100.0 ENST00000628177 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 17412.00 86.01 159.93 100.0 ENST00000630615 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 86.00 37.39 0.79 100.0 DMRT2-209 protein coding mesendoderm (In vitro differentiated cells)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 46.00 20.00 0.42 100.0 DMRT2-209 protein coding mesendoderm (In vitro differentiated cells)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 553.00 70.72 5.08 100.0 SNORD98-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 59.00 7.54 0.54 100.0 SNORD98-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 405281.54 25.36 3722.60 28.47 MIR106AHG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 30282.97 1.90 278.16 67.64 MIR106AHG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 7357.00 0.46 67.58 100.0 MIR106AHG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 17051.82 1.07 156.62 38.09 MIR106AHG-201 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 3.00 25.00 0.03 100.0 MEG8-222 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 221.00 1.25 2.03 91.32 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 437.00 2.47 4.01 93.78 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 42.00 0.24 0.39 100.0 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 4.00 0.02 0.04 100.0 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 1179.00 6.66 10.83 100.0 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 32.00 0.18 0.29 14.41 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 330.00 1.86 3.03 71.27 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 594.00 3.36 5.46 70.21 SNHG14-224 lncRNA mesendoderm (In vitro differentiated cells)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 5389.28 31.30 49.50 76.26 5S_rRNA.20-201 rRNA pseudogene mesendoderm (In vitro differentiated cells)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 65.00 2.75 0.60 100.0 HSPA9-211 retained intron mesendoderm (In vitro differentiated cells)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 670.00 28.35 6.15 96.54 HSPA9-211 retained intron mesendoderm (In vitro differentiated cells)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 521.00 93.54 4.79 100.0 DNM3OS-205 lncRNA mesendoderm (In vitro differentiated cells)