ENCFF720JFQ

Library Details

Organism: Homo Sapiens
Biosample: mesendoderm (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR494ATA
Description: Part of ENCODE experiment ENCSR494ATA.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 91.00 0.67 0.84 100.0 MT-TE-201 Mt tRNA mesendoderm (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 1917.00 14.14 17.61 92.92 MT-TE-201 Mt tRNA mesendoderm (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 3.00 0.02 0.03 100.0 MT-TE-201 Mt tRNA mesendoderm (In vitro differentiated cells)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 15.00 48.39 0.14 100.0 MIR196A1-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 59.00 0.28 0.54 100.0 MT-RNR1-201 Mt rRNA mesendoderm (In vitro differentiated cells)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 5255.00 58.27 48.27 100.0 MIR454-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 158.00 15.44 1.45 100.0 MIR501-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 19614.00 91.60 180.16 100.0 MIR769-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 45.00 60.81 0.41 100.0 KRTAP19-1-201 protein coding mesendoderm (In vitro differentiated cells)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 2398.00 24.02 22.03 100.0 MIR708-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 206.00 78.93 1.89 100.0 MIR509-3-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 8.00 50.00 0.07 100.0 MIR543-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 4511.00 95.57 41.43 100.0 MIR301B-201 miRNA mesendoderm (In vitro differentiated cells)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 433.00 31.68 3.98 80.19 RNU1-82P-201 snRNA mesendoderm (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 2.00 0.14 0.02 100.0 SNORD66-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 434.00 29.44 3.99 50.17 SNORD66-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 15.00 1.02 0.14 100.0 SNORD66-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 3.00 0.20 0.03 100.0 SNORD66-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 1429.00 80.19 13.13 100.0 U3.17-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 900.00 51.43 8.27 100.0 SNORD17-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 50.00 0.79 0.46 100.0 SNORD72-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 11.00 1.84 0.10 100.0 SNORD70B-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 226.00 10.15 2.08 98.26 RNY4P18-201 misc RNA mesendoderm (In vitro differentiated cells)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 242.00 21.45 2.22 100.0 SNORD90-201 snoRNA mesendoderm (In vitro differentiated cells)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 439.00 38.92 4.03 80.7 SNORD90-201 snoRNA mesendoderm (In vitro differentiated cells)