ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 530.00 13.89 3.51 99.25 MIR126-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 3192.00 83.67 21.14 100.0 MIR126-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 4306.00 53.34 28.52 100.0 MIR374A-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 15001.00 81.20 99.37 100.0 MIR31-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 30.25 0.04 0.20 68.74 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 57.00 0.08 0.38 39.58 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 36.56 0.05 0.24 51.5 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 186.00 0.25 1.23 100.0 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 2.00 0.00 0.01 100.0 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 247.00 0.33 1.64 85.47 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 7.00 0.01 0.05 100.0 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 8560.00 11.46 56.70 77.14 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 497.00 0.67 3.29 100.0 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 9.00 0.01 0.06 9.38 RNA5S12-201 rRNA trophoblast cell (In vitro differentiated cells)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 688.00 7.98 4.56 100.0 Y_RNA.14-201 misc RNA trophoblast cell (In vitro differentiated cells)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 359.00 36.45 2.38 100.0 RNU5E-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 56.00 14.51 0.37 100.0 SNORA31-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 461.00 0.87 3.05 67.99 RNA5SP389-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 66.00 0.12 0.44 61.11 RNA5SP389-201 rRNA pseudogene trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 26.00 1.57 0.17 100.0 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 364.70 21.98 2.42 35.17 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1.00 0.06 0.01 50.0 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 11.00 0.66 0.07 19.64 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1.00 0.06 0.01 100.0 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 735.65 44.34 4.87 70.4 RNU5A-1-201 snRNA trophoblast cell (In vitro differentiated cells)