ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 29.18 0.08 0.19 19.71 SNHG5-273 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 6.00 0.02 0.04 100.0 SNHG5-273 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 176.00 0.51 1.17 100.0 SNHG5-273 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 141.49 0.41 0.94 82.26 SNHG5-273 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 5.00 0.01 0.03 55.56 SNHG5-273 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 102.00 0.29 0.68 100.0 SNHG5-273 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 25841.00 74.41 171.18 100.0 SNHG5-273 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 18.00 0.05 0.12 100.0 SNHG5-273 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 1.00 0.02 0.01 100.0 SNHG14-323 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 1.00 0.73 0.01 100.0 MEG8-251 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 1.00 0.73 0.01 100.0 MEG8-251 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 6.00 0.50 0.04 100.0 SNHG14-336 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 2.00 0.17 0.01 33.33 SNHG14-336 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 6169.00 71.51 40.86 100.0 FMN2-209 protein coding CDS not defined trophoblast cell (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 619.00 1.46 4.10 30.84 LINC02739-203 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 9431.00 22.21 62.47 100.0 LINC02739-203 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 1032.00 2.43 6.84 100.0 LINC02739-203 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 7250.00 17.08 48.03 100.0 LINC02739-203 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 1388.00 3.27 9.19 69.16 LINC02739-203 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 46.00 59.74 0.30 100.0 MIR124-1HG-216 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 191.00 22.68 1.27 100.0 SNHG10-212 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 85.14 1.87 0.56 97.87 SNHG19-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 0.98 0.02 0.01 2.34 SNHG19-202 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 149580.00 68.08 990.85 100.0 MIR222HG-206 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 53260.00 24.24 352.81 97.28 MIR222HG-206 lncRNA trophoblast cell (In vitro differentiated cells)