ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 404.00 47.25 2.68 100.0 MIR99AHG-262 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 1949.00 4.35 12.91 100.0 MIR9-2HG-225 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 39507.00 88.20 261.70 97.12 MIR9-2HG-225 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 1.00 11.11 0.01 100.0 MEG8-233 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 6.00 0.10 0.04 100.0 SNHG14-278 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 2.00 0.65 0.01 100.0 SNHG17-252 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 2.00 0.26 0.01 33.33 SNHG14-288 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 18.00 2.33 0.12 90.0 SNHG14-288 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 1.00 3.45 0.01 100.0 SNHG14-306 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 5.00 17.24 0.03 100.0 SNHG14-306 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 4.00 13.79 0.03 100.0 SNHG14-306 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 3171.00 51.20 21.01 100.0 ENST00000666735 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 0.65 0.02 0.00 32.67 SNHG14-312 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 0.93 0.03 0.01 46.45 SNHG14-312 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 3.00 30.00 0.02 100.0 MEG8-244 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 2217.00 2.09 14.69 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 28187.00 26.62 186.72 97.06 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 8.57 0.01 0.06 38.95 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 2183.00 2.06 14.46 96.42 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 15791.00 14.91 104.60 97.51 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 120.00 0.11 0.79 39.09 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 712.00 0.67 4.72 99.86 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 8718.00 8.23 57.75 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 171.00 0.16 1.13 89.06 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 36.00 0.03 0.24 100.0 SNHG1-248 lncRNA trophoblast cell (In vitro differentiated cells)