ENCFF714LDG

Library Details

Organism: Homo Sapiens
Biosample: trophoblast cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR083HYC
Description: Part of ENCODE experiment ENCSR083HYC.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 118.00 1.74 0.78 100.0 MT-TS2-201 Mt tRNA trophoblast cell (In vitro differentiated cells)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 980.00 14.41 6.49 65.42 MT-TS2-201 Mt tRNA trophoblast cell (In vitro differentiated cells)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 3337.00 72.26 22.11 100.0 MT-TL2-201 Mt tRNA trophoblast cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 1144.00 17.73 7.58 75.11 MT-TE-201 Mt tRNA trophoblast cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 379.00 5.87 2.51 35.19 MT-TE-201 Mt tRNA trophoblast cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 2.00 0.03 0.01 100.0 MT-TE-201 Mt tRNA trophoblast cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 70.00 1.08 0.46 100.0 MT-TE-201 Mt tRNA trophoblast cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 27.00 0.42 0.18 90.0 MT-TE-201 Mt tRNA trophoblast cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 11.00 0.17 0.07 100.0 MT-TE-201 Mt tRNA trophoblast cell (In vitro differentiated cells)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 88.00 1.36 0.58 100.0 MT-TE-201 Mt tRNA trophoblast cell (In vitro differentiated cells)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 72.00 61.54 0.48 100.0 MIR196A1-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 84.00 0.62 0.56 100.0 MT-RNR1-201 Mt rRNA trophoblast cell (In vitro differentiated cells)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 4852.00 49.32 32.14 100.0 MIR454-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 487.00 10.45 3.23 100.0 MIR501-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 23598.00 91.18 156.32 100.0 MIR769-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 48.00 59.26 0.32 100.0 KRTAP19-1-201 protein coding trophoblast cell (In vitro differentiated cells)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 264.00 30.14 1.75 100.0 MIR708-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 688.00 84.83 4.56 100.0 MIR509-3-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 1.00 25.00 0.01 100.0 MIR543-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 4319.00 91.33 28.61 100.0 MIR301B-201 miRNA trophoblast cell (In vitro differentiated cells)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 573.00 35.59 3.80 80.93 RNU1-82P-201 snRNA trophoblast cell (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 7.00 0.32 0.05 100.0 SNORD66-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 5.00 0.23 0.03 100.0 SNORD66-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 870.00 39.19 5.76 60.33 SNORD66-201 snoRNA trophoblast cell (In vitro differentiated cells)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 4234.00 80.80 28.05 100.0 U3.17-201 snoRNA trophoblast cell (In vitro differentiated cells)