ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 103600.00 64.01 593.62 95.12 MIR30A-201 miRNA stomach (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 160506.00 92.40 919.68 94.91 MIR27B-201 miRNA stomach (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1314.00 0.76 7.53 100.0 MIR27B-201 miRNA stomach (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 27.00 100.00 0.15 100.0 MIR196A2-201 miRNA stomach (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 188.00 95.43 1.08 100.0 MIR577-201 miRNA stomach (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 199.00 80.24 1.14 90.45 MIR654-201 miRNA stomach (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 1517.00 86.00 8.69 96.07 MIR204-201 miRNA stomach (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 1822.00 94.80 10.44 100.0 MIR152-201 miRNA stomach (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 4.00 22.22 0.02 100.0 MIR138-1-201 miRNA stomach (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 4541.00 90.84 26.02 100.0 MIR30C1-201 miRNA stomach (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 559.00 90.31 3.20 100.0 MIR660-201 miRNA stomach (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 356.00 8.20 2.04 100.0 MIR125B1-201 miRNA stomach (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 2999.00 69.10 17.18 83.31 MIR125B1-201 miRNA stomach (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 89.00 52.05 0.51 100.0 MIR493-201 miRNA stomach (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 54.00 31.58 0.31 100.0 MIR493-201 miRNA stomach (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 327225.32 52.85 1874.97 57.46 MIR182-201 miRNA stomach (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 158628.74 25.62 908.93 30.07 MIR182-201 miRNA stomach (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 7276.00 86.50 41.69 89.98 MIR100-201 miRNA stomach (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 215.00 93.89 1.23 100.0 MIR301A-201 miRNA stomach (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 8101.00 94.82 46.42 97.97 MIR130A-201 miRNA stomach (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 387.00 4.53 2.22 32.52 MIR130A-201 miRNA stomach (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 178257.00 97.26 1021.39 98.23 MIRLET7F2-201 miRNA stomach (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 254.00 51.52 1.46 100.0 MIR652-201 miRNA stomach (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 17.00 77.27 0.10 100.0 MIR653-201 miRNA stomach (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 2753.00 76.54 15.77 100.0 MIR140-201 miRNA stomach (Tissue)