ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 26792.00 58.96 153.52 93.04 MIR30D-201 miRNA stomach (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 1515.00 15.45 8.68 90.99 MIR126-201 miRNA stomach (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 7924.00 80.82 45.40 100.0 MIR126-201 miRNA stomach (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 58.00 39.19 0.33 100.0 MIR374A-201 miRNA stomach (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 3088.00 83.91 17.69 100.0 MIR31-201 miRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 144.69 0.05 0.83 38.08 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 1826.00 0.65 10.46 59.69 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 307.32 0.11 1.76 60.14 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 298.00 0.11 1.71 68.82 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 45.00 0.02 0.26 38.46 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 12.00 0.00 0.07 100.0 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 96.00 0.03 0.55 77.42 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 190.00 0.07 1.09 100.0 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 6917.00 2.45 39.63 84.87 RNA5S12-201 rRNA stomach (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 713.00 39.46 4.09 100.0 Y_RNA.14-201 misc RNA stomach (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 77.00 7.03 0.44 100.0 RNU5E-1-201 snRNA stomach (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 350.00 8.85 2.01 100.0 SNORA31-201 snoRNA stomach (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 115.00 2.06 0.66 100.0 RNA5SP389-201 rRNA pseudogene stomach (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 10.00 0.18 0.06 32.26 RNA5SP389-201 rRNA pseudogene stomach (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 23.00 0.41 0.13 24.21 RNA5SP389-201 rRNA pseudogene stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 3139.00 10.75 17.99 72.33 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 3380.00 11.57 19.37 58.15 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 3897.00 13.34 22.33 67.35 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 804.21 2.75 4.61 67.47 RNU5A-1-201 snRNA stomach (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 4453.00 15.24 25.52 67.61 RNU5A-1-201 snRNA stomach (Tissue)