ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 282.00 1.07 1.62 100.0 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 2002.82 7.60 11.48 28.65 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 5398.15 20.49 30.93 70.67 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 1041.89 3.95 5.97 34.81 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 1673.82 6.35 9.59 70.63 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 57.00 0.22 0.33 100.0 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 2926.14 11.11 16.77 72.47 ENST00000756336 lncRNA stomach (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 132.00 8.76 0.76 100.0 ENST00000756452 lncRNA stomach (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 299.00 11.49 1.71 100.0 ENST00000760093 lncRNA stomach (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 46.00 1.77 0.26 100.0 ENST00000760093 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 9.00 0.02 0.05 100.0 LINC02806-241 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 5357.00 14.62 30.70 83.49 LINC02806-241 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 195.00 0.53 1.12 100.0 LINC02806-241 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 21638.00 59.05 123.98 90.46 LINC02806-241 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_307_324_+ 307–324 102.00 0.28 0.58 100.0 LINC02806-241 lncRNA stomach (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 1583.00 95.65 9.07 100.0 EHBP1-AS1-210 lncRNA stomach (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 2146.00 51.00 12.30 100.0 ENST00000770398 lncRNA stomach (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 363.00 8.63 2.08 100.0 ENST00000770398 lncRNA stomach (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 170.00 4.04 0.97 100.0 ENST00000770398 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 551.00 3.07 3.16 100.0 ENST00000771298 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 231.00 1.29 1.32 100.0 ENST00000771298 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 11919.00 66.44 68.29 94.84 ENST00000771298 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 1292.00 7.20 7.40 100.0 ENST00000771298 lncRNA stomach (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 123.00 2.91 0.70 100.0 ENST00000772672 lncRNA stomach (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 2623.00 68.17 15.03 100.0 ENST00000773843 lncRNA stomach (Tissue)