ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 1505.00 2.79 7.33 100.0 MT-TE-201 Mt tRNA spleen (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 7.00 0.01 0.03 100.0 MT-TE-201 Mt tRNA spleen (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 7.00 63.64 0.03 100.0 MIR196A1-201 miRNA spleen (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 2734.00 51.51 13.31 100.0 MT-RNR1-201 Mt rRNA spleen (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 202.00 75.66 0.98 100.0 MIR454-201 miRNA spleen (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 149.00 49.50 0.73 100.0 MIR501-201 miRNA spleen (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 601.00 89.70 2.93 100.0 MIR769-201 miRNA spleen (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 198.00 75.00 0.96 100.0 KRTAP19-1-201 protein coding spleen (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 3.00 11.54 0.01 100.0 MIR708-201 miRNA spleen (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 13.00 100.00 0.06 100.0 MIR509-3-201 miRNA spleen (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 2.00 13.33 0.01 100.0 MIR543-201 miRNA spleen (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 10.00 100.00 0.05 100.0 MIR301B-201 miRNA spleen (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 809.00 53.65 3.94 79.47 RNU1-82P-201 snRNA spleen (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 6281.00 28.90 30.59 66.55 SNORD66-201 snoRNA spleen (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 360.00 1.66 1.75 100.0 SNORD66-201 snoRNA spleen (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 3046.00 14.01 14.83 100.0 SNORD66-201 snoRNA spleen (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 89.00 64.49 0.43 100.0 U3.17-201 snoRNA spleen (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 14401.00 93.56 70.13 100.0 SNORD17-201 snoRNA spleen (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 947.00 72.73 4.61 100.0 SNORD72-201 snoRNA spleen (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 354.00 73.60 1.72 100.0 SNORD70B-201 snoRNA spleen (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 3515.00 63.82 17.12 89.87 RNY4P18-201 misc RNA spleen (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 22854.00 52.70 111.29 100.0 SNORD69-201 snoRNA spleen (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 7035.00 16.22 34.26 100.0 SNORD69-201 snoRNA spleen (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 6481.00 14.94 31.56 100.0 SNORD69-201 snoRNA spleen (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 2506.00 5.78 12.20 100.0 SNORD69-201 snoRNA spleen (Tissue)