ENCFF682YQJ

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR593MVW
Description: Part of ENCODE experiment ENCSR593MVW. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 1074.00 81.06 5.23 86.27 MIR100-201 miRNA spleen (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 167.00 90.76 0.81 100.0 MIR301A-201 miRNA spleen (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 976.00 9.06 4.75 55.61 MIR130A-201 miRNA spleen (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 9749.00 90.48 47.47 95.52 MIR130A-201 miRNA spleen (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 678683.00 97.69 3304.84 98.37 MIRLET7F2-201 miRNA spleen (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 183.00 70.11 0.89 100.0 MIR652-201 miRNA spleen (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 1784.00 56.83 8.69 100.0 MIR140-201 miRNA spleen (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 31.00 3.98 0.15 100.0 MIR106B-201 miRNA spleen (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 277.00 35.56 1.35 51.78 MIR106B-201 miRNA spleen (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 442.00 52.49 2.15 100.0 SNORD41-201 snoRNA spleen (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 224.00 7.29 1.09 100.0 MT-TF-201 Mt tRNA spleen (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 745.00 24.24 3.63 66.4 MT-TF-201 Mt tRNA spleen (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 232.00 7.55 1.13 43.2 MT-TF-201 Mt tRNA spleen (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 1250.00 38.68 6.09 100.0 MT-TV-201 Mt tRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 7903.00 25.28 38.48 85.25 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 921.00 2.95 4.48 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 232.00 0.74 1.13 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 8594.00 27.50 41.85 88.3 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 28.00 0.09 0.14 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 294.00 0.94 1.43 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 97.00 0.31 0.47 100.0 MT-RNR2-201 Mt rRNA spleen (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 564.00 49.56 2.75 99.65 MT-TI-201 Mt tRNA spleen (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 94.00 8.26 0.46 100.0 MT-TI-201 Mt tRNA spleen (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 20997.00 54.96 102.24 88.33 MT-TQ-201 Mt tRNA spleen (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 2412.32 6.31 11.75 32.22 MT-TQ-201 Mt tRNA spleen (Tissue)