ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 165.55 2.34 0.67 55.37 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 106.54 1.51 0.43 39.61 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 56.00 0.79 0.23 68.29 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 224.94 3.18 0.92 34.34 ENST00000823279 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 548.58 7.76 2.23 74.54 ENST00000823801 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 3227.00 61.76 13.14 75.52 ENST00000827714 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 1046.00 20.02 4.26 24.48 ENST00000827714 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 1076.00 6.36 4.38 100.0 GAS5-377 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 6.00 0.04 0.02 100.0 GAS5-377 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1390.00 8.22 5.66 100.0 GAS5-377 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 13962.00 82.59 56.83 100.0 GAS5-377 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 1.00 20.00 0.00 100.0 MIR205HG-245 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 102670.00 95.35 417.93 99.45 ZFAS1-238 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 66.00 0.06 0.27 100.0 ZFAS1-238 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 60.00 0.06 0.24 100.0 ZFAS1-238 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1221.00 1.13 4.97 100.0 ZFAS1-238 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 6773.00 32.16 27.57 100.0 ZFAS1-242 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 13449.00 63.86 54.75 100.0 ZFAS1-242 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 647.00 33.42 2.63 100.0 ENST00000837997 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 727.00 37.55 2.96 100.0 ENST00000837997 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 9366.00 70.47 38.13 75.87 ENST00000839036 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 76.00 14.23 0.31 100.0 ENST00000849527 lncRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 12641.00 85.15 51.46 92.51 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 33.00 0.22 0.13 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 27.00 0.06 0.11 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA esophagus muscularis mucosa (Tissue)