ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 48.00 0.27 0.20 87.27 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 30.00 0.17 0.12 32.97 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 18.00 0.10 0.07 81.82 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 2407.04 13.33 9.80 71.87 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 832.00 4.61 3.39 100.0 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 169.00 0.94 0.69 100.0 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 2.00 0.01 0.01 100.0 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 553.00 3.06 2.25 100.0 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 19.99 0.11 0.08 40.8 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 42.70 0.24 0.17 65.69 U2.3-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 429.00 3.18 1.75 100.0 U2.6-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 195.00 0.29 0.79 23.61 ENST00000619323 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 65096.00 97.18 264.98 98.49 ENST00000619323 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 253.00 20.55 1.03 100.0 SCARNA4-202 scaRNA esophagus muscularis mucosa (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 1091.00 64.94 4.44 100.0 ENST00000625572 miRNA esophagus muscularis mucosa (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 20228.00 96.55 82.34 100.0 ENST00000628177 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 1027.00 86.67 4.18 100.0 ENST00000630615 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 136.00 51.91 0.55 100.0 DMRT2-209 protein coding esophagus muscularis mucosa (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 47.00 17.94 0.19 100.0 DMRT2-209 protein coding esophagus muscularis mucosa (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 1041.00 55.52 4.24 100.0 SNORD98-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 451.00 24.05 1.84 100.0 SNORD98-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 53653.25 67.71 218.40 70.73 MIR106AHG-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 6.92 0.01 0.03 23.88 MIR106AHG-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 1.00 0.00 0.00 100.0 MIR106AHG-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 20.45 0.03 0.08 70.51 MIR106AHG-201 lncRNA esophagus muscularis mucosa (Tissue)