ENCFF657CXK

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR383PLJ
Description: Part of ENCODE experiment ENCSR383PLJ. The libraries contained in this Experiment come from tissue sub-sections of a53 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 189.00 0.65 0.77 100.0 B4GALNT2-202 protein coding esophagus muscularis mucosa (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 406.00 85.12 1.65 100.0 NDE1-202 protein coding esophagus muscularis mucosa (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 3.00 60.00 0.01 100.0 MIR450B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 135.00 46.71 0.55 100.0 MIR887-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 43.00 93.48 0.18 100.0 MIR889-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 5132.00 63.58 20.89 100.0 SNORD111-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 408.00 56.82 1.66 76.84 SNORD88A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 16.00 100.00 0.07 100.0 MIR548K-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 1364.00 73.22 5.55 100.0 MIR320B2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 87.00 95.60 0.35 100.0 MIR1271-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 650.00 4.90 2.65 100.0 SNORD100-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 125.00 0.94 0.51 100.0 SNORD100-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 9678.00 73.00 39.40 100.0 SNORD100-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1785.00 13.46 7.27 100.0 SNORD100-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 2754.00 61.50 11.21 100.0 SNORD111B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 119.00 4.56 0.48 100.0 RNU2-36P-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 183.00 7.01 0.74 100.0 RNU2-36P-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 973.00 2.40 3.96 100.0 SNORD19C-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 38743.00 95.39 157.71 99.15 SNORD19C-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 1433.00 4.73 5.83 100.0 SNORD12B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 51.00 0.17 0.21 100.0 SNORD12B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 25719.00 84.93 104.69 93.03 SNORD12B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 17.00 1.36 0.07 100.0 Y_RNA.609-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 159.00 39.85 0.65 100.0 Y_RNA.612-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 383941.00 98.63 1562.89 99.88 SNORD71-201 snoRNA esophagus muscularis mucosa (Tissue)