ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 1624.00 1.44 5.91 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 246.00 0.22 0.89 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 799.00 0.71 2.91 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 4324.49 3.84 15.73 68.86 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 519.00 0.46 1.89 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 3615.05 3.21 13.15 52.84 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 2395.00 2.12 8.71 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 6358.30 5.64 23.13 38.48 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 680.00 0.60 2.47 100.0 RNA5SP202-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 2286.00 24.91 8.32 100.0 SNORD114-9-201 snoRNA sigmoid colon (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 6128.00 66.77 22.29 100.0 SNORD114-9-201 snoRNA sigmoid colon (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 7040.00 30.27 25.61 100.0 Y_RNA.234-201 misc RNA sigmoid colon (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 103.00 6.53 0.37 100.0 RNA5SP141-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 588.00 63.23 2.14 100.0 SNORD114-15-201 snoRNA sigmoid colon (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 46.00 19.57 0.17 100.0 ENST00000364722 snoRNA sigmoid colon (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 371.00 52.92 1.35 100.0 SNORD113-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 4028.00 72.75 14.65 100.0 SNORD52-201 snoRNA sigmoid colon (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 14287.00 87.14 51.97 100.0 SNORD114-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 75.00 0.46 0.27 100.0 SNORD114-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 1220.00 7.44 4.44 100.0 SNORD114-3-201 snoRNA sigmoid colon (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 35.00 5.79 0.13 100.0 RNA5SP298-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 1577.00 79.61 5.74 100.0 SNORD113-9-201 snoRNA sigmoid colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 3581.00 10.35 13.03 100.0 SNORD38A-201 snoRNA sigmoid colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 730.00 2.11 2.66 100.0 SNORD38A-201 snoRNA sigmoid colon (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 28297.00 81.76 102.93 100.0 SNORD38A-201 snoRNA sigmoid colon (Tissue)