ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 5222.00 23.26 18.99 72.54 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 57.00 0.25 0.21 100.0 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 398.42 1.78 1.45 44.87 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 2747.00 12.24 9.99 72.38 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2156.00 9.61 7.84 54.71 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 2343.00 10.44 8.52 62.76 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 8736.00 92.19 31.78 100.0 SNORD114-14-201 snoRNA sigmoid colon (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 2636.00 8.45 9.59 100.0 SNORD104-201 snoRNA sigmoid colon (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 50.00 0.16 0.18 100.0 SNORD104-201 snoRNA sigmoid colon (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 41322.00 52.87 150.30 63.05 RNA5SP358-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 27.00 1.26 0.10 43.55 RNA5SP145-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 23.00 4.54 0.08 100.0 RNY4P9-201 misc RNA sigmoid colon (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 944.00 10.91 3.43 100.0 RNU5B-1-201 snRNA sigmoid colon (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 48.00 0.55 0.17 100.0 RNU5B-1-201 snRNA sigmoid colon (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 3734.00 43.15 13.58 100.0 RNU5B-1-201 snRNA sigmoid colon (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 126.00 6.05 0.46 99.21 RNY4P27-201 misc RNA sigmoid colon (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 18.00 0.86 0.07 94.74 RNY4P27-201 misc RNA sigmoid colon (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 704.00 19.13 2.56 100.0 Y_RNA.136-201 misc RNA sigmoid colon (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 8112.00 93.16 29.51 98.78 SNORD114-25-201 snoRNA sigmoid colon (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 3786.00 95.75 13.77 100.0 SNORD113-7-201 snoRNA sigmoid colon (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 207.00 38.91 0.75 100.0 Y_RNA.181-201 misc RNA sigmoid colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 104.00 2.65 0.38 100.0 RNY1-201 misc RNA sigmoid colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 1189.15 30.26 4.33 79.49 RNY1-201 misc RNA sigmoid colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 213.32 5.43 0.78 20.22 RNY1-201 misc RNA sigmoid colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 76.00 1.93 0.28 100.0 RNY1-201 misc RNA sigmoid colon (Tissue)