ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 11729.00 62.79 42.66 89.76 MIR30D-201 miRNA sigmoid colon (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 1573.00 19.32 5.72 96.38 MIR126-201 miRNA sigmoid colon (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 6341.00 77.88 23.06 100.0 MIR126-201 miRNA sigmoid colon (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 104.00 69.80 0.38 100.0 MIR374A-201 miRNA sigmoid colon (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 103.00 83.06 0.37 100.0 MIR31-201 miRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 1559.00 1.35 5.67 55.15 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 21.00 0.02 0.08 100.0 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 6.00 0.01 0.02 100.0 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 133.00 0.12 0.48 46.83 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 48.00 0.04 0.17 100.0 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 613.00 0.53 2.23 99.35 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 1321.56 1.14 4.81 57.11 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 875.00 0.76 3.18 47.81 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 16.00 0.01 0.06 72.73 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 18.00 0.02 0.07 100.0 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 5123.00 4.43 18.63 84.29 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 822.36 0.71 2.99 52.95 RNA5S12-201 rRNA sigmoid colon (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 134.00 17.11 0.49 100.0 Y_RNA.14-201 misc RNA sigmoid colon (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 8.00 5.33 0.03 100.0 RNU5E-1-201 snRNA sigmoid colon (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 73.00 13.39 0.27 100.0 SNORA31-201 snoRNA sigmoid colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 77.00 3.59 0.28 33.77 RNA5SP389-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 60.00 2.80 0.22 55.56 RNA5SP389-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 218.00 10.16 0.79 100.0 RNA5SP389-201 rRNA pseudogene sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 511.43 2.28 1.86 70.16 RNU5A-1-201 snRNA sigmoid colon (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 4713.00 21.00 17.14 78.17 RNU5A-1-201 snRNA sigmoid colon (Tissue)