ENCFF655CDV

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR635SLB
Description: Part of ENCODE experiment ENCSR635SLB. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 1023.00 9.34 3.72 83.65 ENST00000722183 lncRNA sigmoid colon (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 328.00 3.00 1.19 100.0 ENST00000722183 lncRNA sigmoid colon (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 20.00 64.52 0.07 100.0 MIR34BHG-202 lncRNA sigmoid colon (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 11290.00 84.22 41.07 87.17 THBS3-AS1-228 lncRNA sigmoid colon (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 2.00 50.00 0.01 100.0 MIR200CHG-202 lncRNA sigmoid colon (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 1216.00 32.62 4.42 100.0 SNHG16-266 lncRNA sigmoid colon (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 228.00 6.12 0.83 100.0 SNHG16-266 lncRNA sigmoid colon (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 436.00 11.70 1.59 100.0 SNHG16-266 lncRNA sigmoid colon (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 3.00 75.00 0.01 100.0 MEG8-261 lncRNA sigmoid colon (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 144.00 36.46 0.52 100.0 NR2F2-AS1-327 lncRNA sigmoid colon (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 562.00 2.82 2.04 47.67 ENST00000747675 lncRNA sigmoid colon (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 12228.00 61.43 44.48 100.0 ENST00000747675 lncRNA sigmoid colon (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 403.00 2.02 1.47 41.76 ENST00000747675 lncRNA sigmoid colon (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 214.00 1.07 0.78 27.58 ENST00000747675 lncRNA sigmoid colon (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 4196.00 21.08 15.26 100.0 ENST00000747675 lncRNA sigmoid colon (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 29186.00 31.79 106.16 95.24 SNHG26-250 lncRNA sigmoid colon (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 54215.00 59.05 197.20 100.0 SNHG26-250 lncRNA sigmoid colon (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 283.00 23.20 1.03 100.0 LINC02422-207 lncRNA sigmoid colon (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 151.00 5.29 0.55 100.0 ENST00000753088 lncRNA sigmoid colon (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 82.00 2.87 0.30 100.0 ENST00000753088 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 439.47 1.85 1.60 31.87 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 1957.00 8.26 7.12 100.0 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 1451.00 6.12 5.28 100.0 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 465.00 1.96 1.69 100.0 ENST00000756336 lncRNA sigmoid colon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 1528.68 6.45 5.56 33.74 ENST00000756336 lncRNA sigmoid colon (Tissue)