ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 4241.00 52.24 22.32 100.0 SNORD114-22-201 snoRNA transverse colon (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 3751.00 65.55 19.74 100.0 SNORD6-201 snoRNA transverse colon (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 409.00 7.15 2.15 100.0 SNORD6-201 snoRNA transverse colon (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 26.00 2.60 0.14 100.0 RNY3-201 misc RNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 285.00 4.17 1.50 100.0 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 1217.87 17.83 6.41 64.88 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 1732.00 25.36 9.12 97.69 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 415.00 6.08 2.18 100.0 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 779.00 11.41 4.10 93.74 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 629.81 9.22 3.32 33.55 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 390.00 5.71 2.05 100.0 SNORD82-201 snoRNA transverse colon (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 25752.00 96.37 135.55 98.05 MIR146B-201 miRNA transverse colon (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 5357.00 68.31 28.20 100.0 SNHG20-201 lncRNA transverse colon (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 35.00 3.30 0.18 100.0 ATP5MK-205 protein coding transverse colon (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 344.00 32.39 1.81 100.0 ATP5MK-205 protein coding transverse colon (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 4.00 5.41 0.02 100.0 LINC01556-201 lncRNA transverse colon (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 396.00 41.16 2.08 100.0 ATAD3A-202 protein coding transverse colon (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 292.00 32.96 1.54 53.19 TMC5-202 protein coding transverse colon (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 63.00 86.30 0.33 100.0 ZMYM2-203 protein coding transverse colon (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 84.00 1.59 0.44 100.0 RNVU1-7-201 snRNA transverse colon (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 673.00 33.02 3.54 100.0 SNORD24-201 snoRNA transverse colon (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 182.00 65.00 0.96 100.0 Y_RNA.389-201 misc RNA transverse colon (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 17206.00 88.51 90.57 99.69 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 287.00 1.48 1.51 100.0 SNORD101-201 snoRNA transverse colon (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 350.00 1.80 1.84 100.0 SNORD101-201 snoRNA transverse colon (Tissue)