ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 98.34 4.51 0.52 21.29 RNY1-201 misc RNA transverse colon (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 17.00 0.78 0.09 100.0 RNY1-201 misc RNA transverse colon (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 30.00 43.48 0.16 100.0 SNORD115-42-201 snoRNA transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 6387.57 3.76 33.62 38.82 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 1189.00 0.70 6.26 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 6916.00 4.07 36.40 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 866.00 0.51 4.56 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 285.00 0.17 1.50 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 620.00 0.37 3.26 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 212.75 0.13 1.12 65.26 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 483.00 0.28 2.54 100.0 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 136.63 0.08 0.72 37.23 RNA5SP202-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 1378.00 48.87 7.25 100.0 SNORD114-9-201 snoRNA transverse colon (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 1038.00 36.81 5.46 100.0 SNORD114-9-201 snoRNA transverse colon (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 2254.00 14.30 11.86 100.0 Y_RNA.234-201 misc RNA transverse colon (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 223.00 0.14 1.17 100.0 RNA5S9-201 rRNA transverse colon (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 2.00 33.33 0.01 100.0 SNORD115-23-201 snoRNA transverse colon (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 112.00 4.55 0.59 100.0 RNA5SP141-201 rRNA pseudogene transverse colon (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 62.00 46.97 0.33 100.0 SNORD114-15-201 snoRNA transverse colon (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 24.00 17.39 0.13 100.0 ENST00000364722 snoRNA transverse colon (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 42.00 56.00 0.22 100.0 SNORD115-15-201 snoRNA transverse colon (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 73.00 28.08 0.38 100.0 SNORD113-3-201 snoRNA transverse colon (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 2852.00 76.20 15.01 100.0 SNORD52-201 snoRNA transverse colon (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 215.00 28.25 1.13 74.14 SNORD117-201 snoRNA transverse colon (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 75.00 9.86 0.39 28.85 SNORD117-201 snoRNA transverse colon (Tissue)