ENCFF645FQS

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR525WFB
Description: Part of ENCODE experiment ENCSR525WFB. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 111.00 19.82 0.58 100.0 Y_RNA.14-201 misc RNA transverse colon (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 3.00 12.50 0.02 100.0 SNORD115-34-201 snoRNA transverse colon (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 37.00 8.64 0.19 100.0 RNU5E-1-201 snRNA transverse colon (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 32.00 0.92 0.17 66.67 RNA5SP370-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 424.00 41.61 2.23 100.0 SNORA31-201 snoRNA transverse colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 142.00 4.10 0.75 45.95 RNA5SP389-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 9.00 0.26 0.05 100.0 RNA5SP389-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 50.00 1.44 0.26 49.02 RNA5SP389-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 320.00 9.24 1.68 100.0 RNA5SP389-201 rRNA pseudogene transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 52.00 0.25 0.27 100.0 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 1958.00 9.36 10.31 68.01 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 715.28 3.42 3.77 51.83 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1798.00 8.59 9.46 67.8 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 1056.00 5.05 5.56 57.99 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 376.00 1.80 1.98 100.0 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 2244.00 10.72 11.81 76.82 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 951.00 4.54 5.01 56.98 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 304.21 1.45 1.60 56.97 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 1457.00 6.96 7.67 79.18 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 1705.00 8.15 8.97 70.78 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 771.78 3.69 4.06 60.67 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 262.75 1.26 1.38 35.9 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 1167.00 5.58 6.14 39.99 RNU5A-1-201 snRNA transverse colon (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 216.00 75.00 1.14 100.0 SNORD114-14-201 snoRNA transverse colon (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 35.00 0.18 0.18 100.0 SNORD104-201 snoRNA transverse colon (Tissue)