ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 1312.55 7.81 9.71 67.31 ENST00000756336 lncRNA upper lobe of left lung (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 3.00 0.02 0.02 100.0 ENST00000756336 lncRNA upper lobe of left lung (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 845.82 5.04 6.26 82.84 ENST00000756336 lncRNA upper lobe of left lung (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 8.00 3.96 0.06 100.0 ENST00000756452 lncRNA upper lobe of left lung (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 2229.00 36.46 16.49 100.0 ENST00000760093 lncRNA upper lobe of left lung (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 645.00 10.55 4.77 100.0 ENST00000760093 lncRNA upper lobe of left lung (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 11874.00 20.00 87.84 86.46 LINC02806-241 lncRNA upper lobe of left lung (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 317.00 0.53 2.34 100.0 LINC02806-241 lncRNA upper lobe of left lung (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 59.00 0.10 0.44 100.0 LINC02806-241 lncRNA upper lobe of left lung (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 36682.00 61.78 271.35 86.34 LINC02806-241 lncRNA upper lobe of left lung (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 1761.00 95.24 13.03 100.0 EHBP1-AS1-210 lncRNA upper lobe of left lung (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 318.00 10.00 2.35 100.0 ENST00000770398 lncRNA upper lobe of left lung (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 189.00 5.94 1.40 100.0 ENST00000770398 lncRNA upper lobe of left lung (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 1190.00 37.41 8.80 100.0 ENST00000770398 lncRNA upper lobe of left lung (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 329.00 0.93 2.43 100.0 ENST00000771298 lncRNA upper lobe of left lung (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 295.00 0.84 2.18 100.0 ENST00000771298 lncRNA upper lobe of left lung (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 28956.00 81.97 214.20 93.64 ENST00000771298 lncRNA upper lobe of left lung (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 830.00 2.35 6.14 100.0 ENST00000771298 lncRNA upper lobe of left lung (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 55.00 4.70 0.41 100.0 ENST00000772672 lncRNA upper lobe of left lung (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 875.00 27.54 6.47 100.0 ENST00000773843 lncRNA upper lobe of left lung (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 499314.00 30.41 3693.62 84.65 SNHG12-223 lncRNA upper lobe of left lung (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 1138726.00 69.36 8423.60 98.87 SNHG12-223 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 57082.00 47.10 422.26 100.0 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 376.00 0.31 2.78 66.55 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 988.00 0.82 7.31 100.0 SNHG25-206 lncRNA upper lobe of left lung (Tissue)