ENCFF643IED

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR737NPO
Description: Part of ENCODE experiment ENCSR737NPO. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 9010.00 26.25 66.65 91.79 MIR126-201 miRNA upper lobe of left lung (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 23487.00 68.42 173.74 100.0 MIR126-201 miRNA upper lobe of left lung (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 90.00 52.33 0.67 100.0 MIR374A-201 miRNA upper lobe of left lung (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 49.00 83.05 0.36 100.0 MIR31-201 miRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 915.00 0.65 6.77 36.63 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 105.34 0.08 0.78 49.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 198.00 0.14 1.46 77.34 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 16.00 0.01 0.12 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 40.00 0.03 0.30 53.33 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 10.00 0.01 0.07 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 28.00 0.02 0.21 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 76.84 0.05 0.57 46.01 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 76.00 0.05 0.56 100.0 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 37.00 0.03 0.27 77.08 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 4731.00 3.38 35.00 74.93 RNA5S12-201 rRNA upper lobe of left lung (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 212.00 29.24 1.57 100.0 Y_RNA.14-201 misc RNA upper lobe of left lung (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 4.00 0.95 0.03 100.0 RNU5E-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 286.00 10.32 2.12 100.0 SNORA31-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 33.00 1.55 0.24 67.35 RNA5SP389-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 44.00 2.07 0.33 100.0 RNA5SP389-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 13.00 0.61 0.10 27.08 RNA5SP389-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2674.00 11.00 19.78 60.59 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 2747.00 11.30 20.32 63.16 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 595.75 2.45 4.41 59.63 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 4060.00 16.70 30.03 71.78 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)