ENCFF631JZF

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR882DFF
Description: Part of ENCODE experiment ENCSR882DFF. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 4607.00 0.06 21.46 68.16 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 6330.00 0.08 29.48 60.92 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 1095.00 0.01 5.10 94.81 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 13741.00 44.27 64.00 74.13 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 51299.00 98.59 238.93 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 247.00 23.46 1.15 89.49 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 736.00 95.46 3.43 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 54.00 0.02 0.25 93.1 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 4.00 0.00 0.02 6.9 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 210680.00 82.64 981.25 94.24 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 788.00 2.89 3.67 96.21 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 6375.94 23.38 29.70 26.68 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 19221.68 70.48 89.53 78.21 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 2509773.00 98.93 11689.37 99.9 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 6636.00 53.17 30.91 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 23033.00 43.84 107.28 60.43 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 45.00 0.00 0.21 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 232.00 0.00 1.08 77.33 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 5487.00 83.81 25.56 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 10.00 0.25 0.05 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 1844843.00 99.58 8592.43 99.87 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 154.00 0.27 0.72 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 50835.00 88.63 236.77 97.4 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 1028.00 68.67 4.79 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 772.00 46.65 3.60 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA sigmoid colon (Tissue)