ENCFF590YKZ

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 52.00 51.49 1.02 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 8.00 7.92 0.16 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 17.00 17.17 0.33 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 128.00 6.31 2.50 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 61.00 0.50 1.19 48.03 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 86.00 0.71 1.68 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 41.00 13.40 0.80 93.18 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 3.00 0.98 0.06 6.82 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 20.00 5.00 0.39 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 385.00 6.76 7.52 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 2288.00 40.17 44.72 80.71 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 9.00 8.65 0.18 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 9.00 3.66 0.18 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 11.00 0.18 0.21 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 99.00 5.02 1.93 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 19.00 0.96 0.37 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 18.00 0.91 0.35 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 16.00 0.81 0.31 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 307.00 15.56 6.00 82.53 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 116.00 5.88 2.27 46.03 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 527.00 20.42 10.30 61.49 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 764.00 29.60 14.93 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 472.00 21.01 9.22 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 8.00 0.40 0.16 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23248 (Cell line)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 45.00 2.27 0.88 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA GM23248 (Cell line)