ENCFF583SZV

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR573RGL
Description: Part of ENCODE experiment ENCSR573RGL. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 498.00 60.66 2.14 100.0 Y_RNA.389-201 misc RNA stomach (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 111007.00 91.78 477.48 99.18 SNORD101-201 snoRNA stomach (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 774.00 0.64 3.33 100.0 SNORD101-201 snoRNA stomach (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 1130.00 0.93 4.86 100.0 SNORD101-201 snoRNA stomach (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 43272.00 96.78 186.13 100.0 SNORD37-201 snoRNA stomach (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 135209.00 97.25 581.59 99.99 SNORD59A-201 snoRNA stomach (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 563.00 53.98 2.42 100.0 SNORA7B-201 snoRNA stomach (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 62.00 10.95 0.27 100.0 Y_RNA.555-201 misc RNA stomach (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 15725.00 94.36 67.64 95.22 MIR25-201 miRNA stomach (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 21426.00 91.89 92.16 97.62 MIR99B-201 miRNA stomach (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 12009.00 39.18 51.66 82.24 MIR23B-201 miRNA stomach (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 17866.00 58.29 76.85 80.6 MIR23B-201 miRNA stomach (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 1373.00 81.19 5.91 100.0 MIR203A-201 miRNA stomach (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 126.00 1.69 0.54 100.0 MIR199B-201 miRNA stomach (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 6493.00 87.03 27.93 90.95 MIR199B-201 miRNA stomach (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 5032.00 95.00 21.64 100.0 MIR30B-201 miRNA stomach (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 983.00 98.40 4.23 100.0 MIR181D-201 miRNA stomach (Tissue)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 11.00 100.00 0.05 100.0 MIR508-201 miRNA stomach (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 216.00 89.26 0.93 100.0 MIR215-201 miRNA stomach (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 864.00 0.85 3.72 100.0 MIR181A2-201 miRNA stomach (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 83879.00 98.33 360.80 99.17 MIR191-201 miRNA stomach (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 126.00 83.44 0.54 91.3 MIR149-201 miRNA stomach (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 73.00 5.17 0.31 100.0 MIR181C-201 miRNA stomach (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1282.00 90.73 5.51 99.53 MIR181C-201 miRNA stomach (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 722.00 67.73 3.11 100.0 MIR194-1-201 miRNA stomach (Tissue)