ENCFF583SZV

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR573RGL
Description: Part of ENCODE experiment ENCSR573RGL. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 8728.00 5.50 37.54 76.19 LINC02806-241 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 123.00 0.08 0.53 100.0 LINC02806-241 lncRNA stomach (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 121669.00 76.74 523.35 95.87 LINC02806-241 lncRNA stomach (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 1273.00 93.88 5.48 100.0 EHBP1-AS1-210 lncRNA stomach (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 630.00 21.63 2.71 100.0 ENST00000770398 lncRNA stomach (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 574.00 19.70 2.47 100.0 ENST00000770398 lncRNA stomach (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 174.00 5.97 0.75 100.0 ENST00000770398 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 9627.00 63.54 41.41 92.53 ENST00000771298 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 328.00 2.17 1.41 100.0 ENST00000771298 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 71.00 0.47 0.31 100.0 ENST00000771298 lncRNA stomach (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 833.00 5.50 3.58 100.0 ENST00000771298 lncRNA stomach (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 18.00 2.12 0.08 100.0 ENST00000772672 lncRNA stomach (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 459.00 35.01 1.97 100.0 ENST00000773843 lncRNA stomach (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 196548.00 41.93 845.43 89.51 SNHG12-223 lncRNA stomach (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 270698.00 57.75 1164.38 98.97 SNHG12-223 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 456.00 0.40 1.96 100.0 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 53227.00 47.24 228.95 100.0 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 778.00 0.69 3.35 67.77 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 703.00 0.62 3.02 100.0 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 1996.24 1.77 8.59 33.09 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 4574.49 4.06 19.68 46.82 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 4388.51 3.89 18.88 35.08 SNHG25-206 lncRNA stomach (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 14005.00 12.43 60.24 86.79 SNHG25-206 lncRNA stomach (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 744.00 81.94 3.20 84.35 MIR155HG-205 lncRNA stomach (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 76.00 81.72 0.33 100.0 ENST00000784740 lncRNA stomach (Tissue)