ENCFF574WUG

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR634VLA
Description: Part of ENCODE experiment ENCSR634VLA. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 28359.00 45.54 236.54 94.86 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 2209.00 3.55 18.43 100.0 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 2648.00 4.25 22.09 87.83 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 5735.00 9.21 47.84 87.53 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 728.00 1.17 6.07 100.0 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 1755.00 2.82 14.64 80.21 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 2340.00 76.20 19.52 82.69 MIR3142HG-201 lncRNA right lobe of liver (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 2350.00 8.49 19.60 100.0 MIR151A-201 miRNA right lobe of liver (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 20835.00 75.31 173.78 84.24 MIR151A-201 miRNA right lobe of liver (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1862.00 98.21 15.53 100.0 DENND3-221 protein coding right lobe of liver (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 396.00 1.85 3.30 53.51 WDR74-204 protein coding right lobe of liver (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 676.00 3.15 5.64 100.0 WDR74-204 protein coding right lobe of liver (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 344.00 1.60 2.87 46.49 WDR74-204 protein coding right lobe of liver (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 104.00 0.48 0.87 100.0 WDR74-204 protein coding right lobe of liver (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 741.00 3.45 6.18 100.0 WDR74-204 protein coding right lobe of liver (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 822.00 3.83 6.86 66.88 WDR74-204 protein coding right lobe of liver (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 267.00 27.58 2.23 100.0 SCARNA9-201 lncRNA right lobe of liver (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 45508.00 97.54 379.58 100.0 TAF1D-215 retained intron right lobe of liver (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 124331.00 77.19 1037.03 78.88 ENST00000548801 lncRNA right lobe of liver (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 2941.00 43.39 24.53 100.0 ENST00000554988 lncRNA right lobe of liver (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 196.00 2.89 1.63 100.0 ENST00000554988 lncRNA right lobe of liver (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 15642.00 94.64 130.47 100.0 SNHG14-220 retained intron right lobe of liver (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 222.00 1.34 1.85 100.0 SNHG14-220 retained intron right lobe of liver (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 142.00 0.86 1.18 100.0 SNHG14-220 retained intron right lobe of liver (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 3790.00 99.01 31.61 100.0 TEKT4P2-201 transcribed unprocessed pseudogene right lobe of liver (Tissue)