ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 30.00 16.76 0.20 100.0 HCN2-201 protein coding thyroid gland (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 2.00 22.22 0.01 100.0 SLC49A4-201 protein coding thyroid gland (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 89.00 43.00 0.60 100.0 ATP5MC3-201 protein coding thyroid gland (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 58.00 61.05 0.39 100.0 CDC25A-201 protein coding thyroid gland (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 232.00 66.29 1.57 100.0 RUNX3-201 protein coding thyroid gland (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 38.00 38.78 0.26 100.0 BLOC1S4-201 protein coding thyroid gland (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 89.00 21.87 0.60 100.0 ATAD5-201 protein coding thyroid gland (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 35.00 15.98 0.24 100.0 SLITRK5-201 protein coding thyroid gland (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 2.00 25.00 0.01 100.0 HASPIN-201 protein coding thyroid gland (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 337.00 99.41 2.28 100.0 ATG101-201 protein coding thyroid gland (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 5.00 41.67 0.03 100.0 PRICKLE1-201 protein coding thyroid gland (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 9.00 100.00 0.06 100.0 MIR133A2-201 miRNA thyroid gland (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 2.00 10.53 0.01 100.0 PBLD-204 protein coding thyroid gland (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 119817.00 91.35 809.92 97.6 MIRLET7BHG-201 lncRNA thyroid gland (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 5404.00 4.12 36.53 80.86 MIRLET7BHG-201 lncRNA thyroid gland (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 5.00 1.94 0.03 50.0 MIR375-201 miRNA thyroid gland (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 249.00 96.51 1.68 98.81 MIR375-201 miRNA thyroid gland (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 571.00 65.26 3.86 100.0 MIR30E-201 miRNA thyroid gland (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 243.00 27.77 1.64 100.0 MIR30E-201 miRNA thyroid gland (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 43.00 60.56 0.29 100.0 MIR29A-201 miRNA thyroid gland (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 41.00 70.69 0.28 100.0 MIR345-201 miRNA thyroid gland (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 964.00 99.28 6.52 100.0 MIR16-2-201 miRNA thyroid gland (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 2.00 5.88 0.01 100.0 MIR340-201 miRNA thyroid gland (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 32.00 94.12 0.22 100.0 MIR340-201 miRNA thyroid gland (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 119.00 68.79 0.80 100.0 MIR107-201 miRNA thyroid gland (Tissue)