ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 7.00 0.08 0.05 16.28 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 1752.00 21.23 11.84 62.3 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 266.00 3.22 1.80 100.0 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 1163.00 14.09 7.86 79.66 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 1403.00 17.00 9.48 82.53 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 375.00 57.43 2.53 100.0 RNA5SP77-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 1629.00 34.59 11.01 100.0 SNORD114-22-201 snoRNA thyroid gland (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 2873.00 61.01 19.42 98.26 SNORD114-22-201 snoRNA thyroid gland (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 168.00 3.03 1.14 100.0 SNORD6-201 snoRNA thyroid gland (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 4692.00 84.75 31.72 100.0 SNORD6-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 5547.00 27.49 37.50 99.11 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 368.00 1.82 2.49 100.0 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 1702.00 8.43 11.50 88.78 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 3035.11 15.04 20.52 37.21 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 5129.42 25.42 34.67 62.89 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 1463.00 7.25 9.89 100.0 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 123.00 0.61 0.83 100.0 SNORD82-201 snoRNA thyroid gland (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 3961.00 96.19 26.78 98.51 MIR146B-201 miRNA thyroid gland (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 94.00 32.53 0.64 100.0 SNHG20-201 lncRNA thyroid gland (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 9.00 18.37 0.06 100.0 ATP5MK-205 protein coding thyroid gland (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 35.00 50.72 0.24 100.0 ATAD3A-202 protein coding thyroid gland (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 11.00 16.92 0.07 36.67 TMC5-202 protein coding thyroid gland (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 17.00 54.84 0.11 100.0 ZMYM2-203 protein coding thyroid gland (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 80.00 3.77 0.54 100.0 RNVU1-7-201 snRNA thyroid gland (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 30.00 47.62 0.20 100.0 Y_RNA.389-201 misc RNA thyroid gland (Tissue)