ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 316.92 6.65 2.14 30.68 ENST00000823279 lncRNA thyroid gland (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 1042.13 21.88 7.04 77.02 ENST00000823801 lncRNA thyroid gland (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 23.00 67.65 0.16 76.67 ENST00000827714 lncRNA thyroid gland (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 7.00 20.59 0.05 23.33 ENST00000827714 lncRNA thyroid gland (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 182.00 1.43 1.23 100.0 GAS5-377 lncRNA thyroid gland (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 4.00 0.03 0.03 100.0 GAS5-377 lncRNA thyroid gland (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 682.00 5.35 4.61 100.0 GAS5-377 lncRNA thyroid gland (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 11577.00 90.83 78.26 100.0 GAS5-377 lncRNA thyroid gland (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 3.00 0.05 0.02 100.0 ZFAS1-238 lncRNA thyroid gland (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 129.00 2.25 0.87 100.0 ZFAS1-238 lncRNA thyroid gland (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 123.00 2.14 0.83 100.0 ZFAS1-238 lncRNA thyroid gland (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 1650.00 28.72 11.15 100.0 ZFAS1-238 lncRNA thyroid gland (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 8613.00 91.99 58.22 100.0 ZFAS1-242 lncRNA thyroid gland (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 1239.00 71.58 8.38 100.0 ENST00000837997 lncRNA thyroid gland (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 85.00 4.91 0.57 100.0 ENST00000837997 lncRNA thyroid gland (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 1588.00 71.95 10.73 79.44 ENST00000839036 lncRNA thyroid gland (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 17.00 12.88 0.11 100.0 ENST00000849527 lncRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 75995.00 95.72 513.70 97.46 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 4.00 0.01 0.03 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 33.00 0.01 0.22 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 362.00 31.15 2.45 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 560.00 48.19 3.79 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 28.00 18.06 0.19 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 101.00 7.07 0.68 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA thyroid gland (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 877.00 39.29 5.93 69.22 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA thyroid gland (Tissue)