ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 1.00 25.00 0.01 100.0 MIR374A-201 miRNA thyroid gland (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 35.00 87.50 0.24 100.0 MIR31-201 miRNA thyroid gland (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 885.30 0.92 5.98 54.05 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 608.00 0.63 4.11 34.45 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 1170.94 1.22 7.92 52.7 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 5418.00 5.64 36.62 68.71 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 37.00 0.04 0.25 100.0 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 7.00 0.01 0.05 100.0 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 313.00 0.33 2.12 92.6 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 41.00 0.04 0.28 100.0 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 1035.00 1.08 7.00 100.0 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 162.00 0.17 1.10 83.51 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 17.00 0.02 0.11 100.0 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 4764.00 4.96 32.20 80.46 RNA5S12-201 rRNA thyroid gland (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 53.00 32.52 0.36 100.0 Y_RNA.14-201 misc RNA thyroid gland (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 10.00 4.35 0.07 100.0 RNU5E-1-201 snRNA thyroid gland (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 114.00 8.74 0.77 100.0 SNORA31-201 snoRNA thyroid gland (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 66.00 2.61 0.45 100.0 RNA5SP389-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 116.00 4.59 0.78 79.45 RNA5SP389-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 34.00 1.35 0.23 57.63 RNA5SP389-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 3864.00 10.88 26.12 71.02 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 3690.00 10.39 24.94 57.75 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 4707.00 13.25 31.82 66.67 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 959.86 2.70 6.49 61.61 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 5626.00 15.83 38.03 69.94 RNU5A-1-201 snRNA thyroid gland (Tissue)