ENCFF551ARD

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR359CVC
Description: Part of ENCODE experiment ENCSR359CVC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's thyroid gland tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 119.00 5.84 0.80 76.77 MIR222HG-206 lncRNA thyroid gland (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 1786.00 87.68 12.07 100.0 MIR222HG-206 lncRNA thyroid gland (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 113.00 32.47 0.76 100.0 RPSA-216 retained intron thyroid gland (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 15050.00 93.40 101.73 97.63 MIR99AHG-370 lncRNA thyroid gland (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 415.00 2.58 2.81 71.8 MIR99AHG-370 lncRNA thyroid gland (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 138.00 94.52 0.93 100.0 HPS4-237 retained intron thyroid gland (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 1.00 25.00 0.01 100.0 MEG8-253 lncRNA thyroid gland (Tissue)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 1.00 3.85 0.01 100.0 MEG9-206 lncRNA thyroid gland (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 10.00 38.46 0.07 100.0 MEG9-206 lncRNA thyroid gland (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 101.00 11.80 0.68 100.0 DNAJC5-203 nonsense mediated decay thyroid gland (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 166.00 18.34 1.12 100.0 ENST00000707189 TEC thyroid gland (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 24.00 0.10 0.16 100.0 MIR17HG-214 lncRNA thyroid gland (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 9.00 0.04 0.06 100.0 MIR17HG-214 lncRNA thyroid gland (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 5438.24 23.56 36.76 26.18 MIR17HG-214 lncRNA thyroid gland (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 2.00 0.01 0.01 100.0 MIR17HG-214 lncRNA thyroid gland (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 16499.21 71.47 111.53 74.21 MIR17HG-214 lncRNA thyroid gland (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 24.00 0.10 0.16 100.0 MIR17HG-214 lncRNA thyroid gland (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 184.00 0.80 1.24 100.0 MIR17HG-214 lncRNA thyroid gland (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 3355.00 3.21 22.68 77.86 SNHG32-223 lncRNA thyroid gland (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 1395.00 1.34 9.43 100.0 SNHG32-223 lncRNA thyroid gland (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 245.00 0.23 1.66 100.0 SNHG32-223 lncRNA thyroid gland (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 32.00 0.03 0.22 100.0 SNHG32-223 lncRNA thyroid gland (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 97322.00 93.23 657.86 100.0 SNHG32-223 lncRNA thyroid gland (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 14.00 0.07 0.09 100.0 SNHG32-227 lncRNA thyroid gland (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 20190.00 93.96 136.48 98.9 SNHG32-227 lncRNA thyroid gland (Tissue)